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BIOMARKER:

SF3B1 mutation

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Other names: SF3B1, Splicing Factor 3b Subunit 1, Splicing Factor 3b Subunit 1 155kDa, Spliceosome-Associated Protein 155, Splicing Factor 3B Subunit 1, SF3b155, SAP155, Pre-MRNA Splicing Factor SF3b 155 KDa Subunit, Pre-MRNA-Splicing Factor SF3b 155 KDa Subunit, Splicing Factor 3b Subunit 1 155kD, Pre-MRNA Processing 10, SAP 155, Hsh155, PRPF10, PRP10, MDS
Entrez ID:
Related biomarkers:
3d
Fibrotic marrow limiting morphologic classification in MDS/MPN with SF3B1 mutation and thrombocytosis: diagnostic implications under the ICC 2022 framework. (PubMed, Virchows Arch)
After ruxolitinib therapy, he later developed leukocytosis and 2% circulating blasts. Repeat marrow demonstrated ≥ 15% ring sideroblasts. Retrospectively, the initial biopsy fulfills ICC 2022 criteria for MDS/MPN-SF3B1-T, highlighting the diagnostic value of genetics-integrated classification in fibrotic marrows.
Journal
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NRAS (Neuroblastoma RAS viral oncogene homolog) • JAK2 (Janus kinase 2) • SF3B1 (Splicing Factor 3b Subunit 1) • ASXL1 (ASXL Transcriptional Regulator 1)
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SF3B1 mutation • NRAS G12
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Jakafi (ruxolitinib)
5d
Splicing factor mutations clearance and outcomes in clonal myeloid neoplasms: a referral center experience. (PubMed, Ann Hematol)
Median OS was 27.2 vs. 17.2 months in AML and 16.7 vs. 23.7 months in MDS/CMML for clearance versus persistence groups, respectively. These findings suggest that SF mutation clearance does not significantly impact OS but may influence other clinical outcomes in patients with myeloid neoplasms harboring SF mutations.
Journal
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SF3B1 (Splicing Factor 3b Subunit 1) • SRSF2 (Serine and arginine rich splicing factor 2) • U2AF1 (U2 Small Nuclear RNA Auxiliary Factor 1) • ZRSR2 (Zinc Finger CCCH-Type, RNA Binding Motif And Serine/Arginine Rich 2)
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SF3B1 mutation • SRSF2 mutation
7d
Divergent RNA structures support accurate splicing of the SF3B1-sensitive MAP3K7 intron. (PubMed, bioRxiv)
These structural changes are associated with increased ensemble diversity. Our results demonstrate that although there are key structured regions within an RNA, there is also extensive variability where divergent RNA structures allow for accurate splicing.
Journal
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SF3B1 (Splicing Factor 3b Subunit 1) • SRSF2 (Serine and arginine rich splicing factor 2) • U2AF1 (U2 Small Nuclear RNA Auxiliary Factor 1) • MAP3K7 (Mitogen-Activated Protein Kinase Kinase Kinase 7)
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SF3B1 mutation
7d
Long read sequencing reveals novel isoforms and spliceosome-mutant-enriched transcripts in AML and MDS. (PubMed, bioRxiv)
This dataset is a valuable community resource, enabling detection of new transcripts in short read data sets. An interactive portal to explore splicing patterns in these data is available at https://leylab.org/isoforms/ .
Journal
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SF3B1 (Splicing Factor 3b Subunit 1) • SRSF2 (Serine and arginine rich splicing factor 2) • U2AF1 (U2 Small Nuclear RNA Auxiliary Factor 1)
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SF3B1 mutation • SRSF2 mutation
9d
Clinical Characteristics and Prognosis Analysis of MDS-RS Patients with Wild-Type SF3B1 (PubMed, Zhongguo Shi Yan Xue Ye Xue Za Zhi)
Patients with wild-type SF3B1 have a significantly shorter OS compared to those with SF3B1 mutations, and they also have a higher risk of transformation to AML, which may be associated with TP53 mutations.
Journal
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TP53 (Tumor protein P53) • DNMT3A (DNA methyltransferase 1) • RUNX1 (RUNX Family Transcription Factor 1) • SF3B1 (Splicing Factor 3b Subunit 1) • ASXL1 (ASXL Transcriptional Regulator 1) • TET2 (Tet Methylcytosine Dioxygenase 2) • U2AF1 (U2 Small Nuclear RNA Auxiliary Factor 1) • SETBP1 (SET Binding Protein 1)
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TP53 mutation • SF3B1 mutation
25d
Hemophagocytic Lymphohistiocytosis Triggered by Legionella pneumophila and SARS-CoV-2 Infection in GATA2 Deficiency. (PubMed, Clin Case Rep)
Hemophagocytic lymphohistiocytosis (HLH) is a rare occurrence that can present further management challenges. Here, we describe a young adult with GATA2 deficiency presenting with Legionella pneumonia, COVID-19, and HLH with underlying SF3B1-mutated myelodysplasia that responded successfully to allogeneic hematopoietic stem cell transplantation.
Journal
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SF3B1 (Splicing Factor 3b Subunit 1)
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SF3B1 mutation
1m
U2af1S34F and U2af1Q157R myeloid neoplasm-associated hotspot mutations induce distinct hematopoietic phenotypes in mice. (PubMed, Leukemia)
Collectively, our results support that U2AF1S34F and U2AF1Q157R mutations induce distinct hematopoietic, gene expression, and RNA splicing phenotypes in vivo. Larger population studies will be needed to determine if these phenotypic changes translate into clinico-pathologic differences in patients, warranting separate classification.
Preclinical • Journal
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SF3B1 (Splicing Factor 3b Subunit 1) • SRSF2 (Serine and arginine rich splicing factor 2) • U2AF1 (U2 Small Nuclear RNA Auxiliary Factor 1)
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SF3B1 mutation • SRSF2 mutation
1m
Luspatercept for Anemia in Lower Risk MDS or Non-proliferative MDS/MPN Neoplasms (clinicaltrials.gov)
P2, N=6, Active, not recruiting, H. Lee Moffitt Cancer Center and Research Institute | Recruiting --> Active, not recruiting | N=70 --> 6
Enrollment closed • Enrollment change
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SF3B1 (Splicing Factor 3b Subunit 1) • SRSF2 (Serine and arginine rich splicing factor 2) • U2AF1 (U2 Small Nuclear RNA Auxiliary Factor 1) • ZRSR2 (Zinc Finger CCCH-Type, RNA Binding Motif And Serine/Arginine Rich 2)
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SF3B1 mutation • SRSF2 mutation
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Reblozyl (luspatercept-aamt)
1m
Circulating Tumor DNA Monitoring in Patients with Uveal Melanoma Using Mutation-Agnostic Multiplex Drop-Off ddPCR Assays. (PubMed, Anal Chem)
Our mutation-agnostic multiplex drop-off ddPCR assays provide a sensitive, specific, and cost-effective alternative to targeted NGS and simplex ddPCR for ctDNA monitoring in UM. By minimizing reliance on prior knowledge of tumor genotype with NGS, these assays enable broader clinical applicability for real-time treatment monitoring in UM.
Journal • Circulating tumor DNA
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GNAQ (G Protein Subunit Alpha Q) • SF3B1 (Splicing Factor 3b Subunit 1) • GNA11 (G Protein Subunit Alpha 11) • CYSLTR2 (Cysteinyl Leukotriene Receptor 2) • PLCB4 (Phospholipase C Beta 4)
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SF3B1 mutation
1m
Different SF3B1 Mutation Hotspots Show Hematopoietic Lineage-Specific VAF Patterns and Correlate with Distinct Genetic and Prognostic Profiles in Patients with Myeloid Neoplasms. (PubMed, Cancers (Basel))
Distinct mutational patterns and clonal progression mechanisms were observed for different SF3B1 mutation types and depending on the affected hematopoietic lineage. Our findings suggest that the SF3B1 VAF across different lineages may refine patient stratification beyond mutation type alone.
Journal • Tumor mutational burden
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TMB (Tumor Mutational Burden) • SF3B1 (Splicing Factor 3b Subunit 1)
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SF3B1 mutation
1m
Targeting the nuclear export receptor exportin-1 in acute myeloid leukaemia: From biology to clinical translation. (PubMed, Clin Transl Med)
XPO1 hyperactivation rewires nucleocytoplasmic transport and sustains leukaemogenic programs in genetically defined acute myeloid leukaemia (AML) subsets. Selective XPO1 inhibitors (selinexor, eltanexor) show preferential activity in NPM1-mutated, DEK::NUP214-positive and SF3B1-mutated myeloid neoplasms. Combination strategies with hypomethylating agents, BCL-2 inhibitors and other targeted therapies enhance depth and durability of responses but are limited by toxicity. Future clinical trials should focus on molecularly selected populations, biomarker-guided dosing and translational endpoints such as measurable residual disease (MRD) and clonal dynamics.
Review • Journal • IO biomarker
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NPM1 (Nucleophosmin 1) • SF3B1 (Splicing Factor 3b Subunit 1) • NUP214 (Nucleoporin 214) • XPO1 (Exportin 1)
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NPM1 mutation • SF3B1 mutation
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Venclexta (venetoclax) • Xpovio (selinexor) • eltanexor (KPT-8602)